Brief Instructions for Setup

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Brief Instructions for Setup

Pre-requisites:

1. EP Workbench
2. Docker Desktop & OpenCARP Docker Image
3. Miniconda/ Anaconda for Python Environment

(1) Install EP Workbench

Install EP Workbench, a data parsing, analysis and simulation platform for electrophysiology research.

• MacOS Apple Silicon: EP workbench - MacOS version available from The University of Edinburgh
• Windows 10+: EP workbench - Windows version available from The University of Edinburgh

1. Press on “Order Now” (Free of Charge)
2. Fill in your details and your Authorised Signatory’s detail (this should be a representative from the department/ business function who has the authority to sign on behalf of the employer). They are required to approve the download.
3. Once the Authorised Signatory has approved the purchased, you can download the zip file.
4. For installation: follow this guide.

(2) Docker Desktop & OpenCARP Docker Image

Install Docker and download the docker image to run OpenCARP simulations.

• Docker Desktop: https://www.docker.com/products/docker-desktop/
• OpenCARP Image: Installation | openCARP

1. Install docker desktop from the link above, simply Download Docker Desktop button and select your system.

NOTE: If you are on Windows there may be additionally requirements to update/install WSL. Docker Desktop install wizard should guide you through that.

3. To install OpenCARP Image, open your terminal and type the command below. It can take up to 10 minutes to download based on your system/internet connection.

docker pull docker.opencarp.org/opencarp/opencarp:latest

(3) Miniconda/ Anaconda for Python Environment

Ensure conda is installed - Installing Anaconda Distribution - Anaconda

1. Verify you installation by running conda --version

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